Nessa the Chemist

@SuperScienceGrl

Online organic chemistry resources

Here is a list of resources where you can learn and practise organic chemistry online, inspired by some friends who wanted practice for job interviews. Many thanks to Jacob Hiles for helping collect links.

Most are aimed at active researchers in the field, but some introductory resources are listed too. You can filter using the checkboxes at the top right.

I also have a Links page for other recommended chemistry/research resources.
It contains specific pages for:

Phil Baran lecture notes

Phil Baran – The Scripps Research Institute; advanced level

  • Heterocyclic chemistry

Jeff Bode open source lecture notes

Jeff Bode – ETH Zürich; advanced level
All quick references/study guides for the subject matter

  • Organic synthesis
  • FMO theory & pericyclic reactions
  • Simple protecting groups
  • Organometallics in synthesis
  • Catalysis in synthesis
  • Stereoselective reactions
  • Ligation & bioconjugation
  • Automated synthesis
  • Saturated N-heterocycle synthesis

Stu Cantrill lecture notes

Stu Cantrill – UCLA (now Springer Nature); introductory/advanced level

  • Introduction to organic chemistry
  • Introductory organic mechanisms
  • Retrosynthetic analysis
  • Nanoscience & novel materials

Dave Evans introduction to organic chemistry lecture notes

Dave Evans – Harvard University; introductory level
With appendices containing useful papers and pKa tables.

  • Introduction to organic chemistry
  • Pericyclic reactions
  • Simple mechanisms
  • Enol(ate) chemistry

Eugene Kwan lecture notes

Eugene Kwan – Merck; introductory/advanced level

  • Reactivity & bonding
  • Pericyclic reactions
  • Simple protecting groups
  • Stereoselective reactions
  • Conformational analysis
  • Introductory organic mechanisms
  • Kinetics
  • Computational chemistry
  • NMR spectroscopy
  • Introduction to spectroscopy

James Keeler NMR lecture notes

James Keeler – Cambridge University; specialist level

  • NMR spectroscopy
  • Quantum mechanics for NMR spectroscopy
  • NMR pulse sequences
  • Coherence selection in NMR spectroscopy

MIT OpenCourseWare lecture notes

Massachusetts Institute of Technology; introductory/advanced level

  • Introduction to organic chemistry
  • Chemical biology & biochemistry
  • Geochemistry
  • Materials chemistry
  • Chemical engineering
  • Structure determination
  • Organometallic chemistry (inorganic focus)
  • Astrochemistry

Andy Myers lecture notes

Andy Myers – Harvard University; introductory level

  • Organometallics in synthesis
  • Introductory organic mechanisms
  • Metal-catalysed cross-coupling
  • Stereoselective synthesis
  • Small and normal carbocycles

Oxford University Synthesis for Biology & Medicine CDT lecture notes

Oxford University Synthesis for Biology & Medicine CDT; advanced level

  • Stereoselective synthesis
  • Catalysis
  • Radical chemistry
  • Heterocyclic chemistry
  • Pericyclic chemistry
  • Computational chemistry
  • Total synthesis
  • Drug discovery
  • Chemical biology
  • Introduction to process chemistry
  • Introduction to agrochemistry

Martin Smith pericyclic chemistry lecture notes

Martin Smith – Oxford University; introductory/advanced level

  • Pericyclic chemistry

Giovanni Poli organometallic chemistry lecture notes

Giovanni Poli – Sorbonne Université; introductory/advanced level

  • Palladium and organometallic chemistry

Peter Vollhardt introduction to organic chemistry lecture notes

Peter Vollhardt – UC Berkeley; introductory level
Some rather colourful introductory lecture slide sets, apparently based on Vollhardt's Organic Chemistry: Structure and Function textbook (not linked due to American textbook pricing).

Tim Wallace lecture notes

Tim Wallace – University of Manchester; introductory level

  • Pericyclic reactions
  • Drug discovery
  • Stereochemistry

Christina White lecture notes

Christina White – University of Illinois at Urbana-Champaign; advanced level

  • Organometallic chemistry

University of York Exploring Everyday Chemistry lecture course

University of York; introductory level

  • The chemistry of everyday

Cheminfographic

Roman Valiulin – Vertex Pharmaceuticals; introductory/advanced level
A collection of amazing infographics on many concepts in synthesis and medicinal chemistry. Thanks to Ed Sherer from Merck for pointing this out!

Chemistry by Design

Jon T Njardarson – University of Arizona; advanced/specialist level
See real, step-by-step total syntheses of thousands of molecules, with the option of quizzing yourself on products, reagents, and/or reaction names.

ACS DoC: Total Synthesis Database

Hans Reich – University of Wisconsin-Madison; advanced/specialist level
A database of total syntheses, filtered by named reactions.

SynArchive

Daniel Beaudoin & Philippe Murphy; advanced/specialist level
Browse a long list of total syntheses, by molecule name, date, PI, or carbon count.

Ed Anderson group meetings

Ed Anderson group – Oxford University; advanced/specialist level
Literature topic reviews on synthetic organic chemistry.

Phil Baran group meetings

Phil Baran group – The Scripps Research Institute; advanced/specialist level
Hundreds of information-dense slidesets and a few videos, categorized by topic.

  • Synthetic organic chemistry
  • Pharmaceutical chemistry
  • Chemist biographies
  • Very broad range of other topics related to organic chemistry

Scott Denmark group meetings

Scott Denmark group – University of Illinois at Urbana-Champaign; advanced/specialist level
In-depth presentations generally intended as full reviews of a topic.

  • Synthetic organic chemistry
  • Other topics related to organic chemistry

Tim Donohoe group meetings

Tim Donohoe group – Oxford University; advanced/specialist level
An archive of short presentations from the 2010's, usually focussing on one paper or a selection of papers.

  • Synthetic organic chemistry
  • Problem sets
  • Other topics related to organic chemistry

Tanja Gaich group meetings

Tanja Gaich group – Universität Konstanz; advanced/specialist level
Overview slide sets offering introductions to topics and people.

  • Synthetic organic chemistry
  • Chemist biographies
  • Other topics related to organic chemistry

David MacMillan group meetings

David MacMillan group – Princeton University; advanced/specialist level
A very diverse range of topics ranging across all fields of chemistry, biology, and physics – particularly in recent years. Great notes for introduction to very many topics.

  • Synthetic organic chemistry
  • Pharmaceutical chemistry
  • Chemical biology
  • Physical chemistry
  • Neuroscience
  • Other topics related to chemistry and biology

Princeton University supergroup meetings

Princeton University; advanced/specialist level
An archive of presentations from the 2000's.

  • Synthetic organic chemistry

Richmond Sarpong group meetings

Richmond Sarpong group – University of California Berkeley; advanced/specialist level
Overview slide sets offering introductions to topics and people.

  • Organic chemistry
  • Chemist biographies

Ryan Shenvi group meetings

Ryan Shenvi group – The Scripps Research Institute; advanced/specialist level
Summary slide sets categorized by topic.

  • Synthetic organic chemistry
  • Pharmaceuticals
  • Chemist biographies

Brian Stoltz group meetings

Brian Stoltz group – Caltech; advanced level
An archive of short synthetic chemistry topic summaries.

University of Utah Synthesis Club

University of Utah; advanced/specialist level
Short, informative slide sets usually focussing on a single paper or a selection of papers.

  • Synthetic organic chemistry
  • Named reactions
  • Problem sets

Ed Anderson problem sets

Ed Anderson group – Oxford University; advanced/specialist level
Short and interesting synthetic organic chemistry problem sets.

Tim Donohoe group problem sets

Tim Donohoe group – Oxford University; advanced/specialist level
An archive of synthetic chemistry problem sets from the 2010's.

Tanja Gaich group problem sets

Tanja Gaich group – Universität Konstanz; advanced/specialist level
Hundreds of synthetic chemistry problem sets derived from literature total syntheses.

Harvard University 'Challenging Problems in Chemistry & Chemical Biology

Dave Evans & others – Harvard University; advanced/specialist level
Possibly the most famous synthetic chemistry problem set, and possibly the most interesting there is! Updated to be searched and filtered by the brilliant people at the ACS Division of Organic Chemistry.

Michigan State University introductory problems

Michigan State University; introductory level
Undergraduate level problem sets.

  • Introductory organic chemistry
  • Introductory organic spectroscopy
  • Introductory chemical biology

Nagoya University Laboratory of Natural Products problem sets

Laboratory of Natural ProductsNagoya University; advanced/specialist level
A list of mechanism-based problem sets from the literature. Answer sets are provided separately.

NMR Challenge

IOCB Prague; introductory/advanced level
A set of interactive challenges to interpret real NMR spectra and identify the compounds depicted, from only the molecular formulae and 1H and 13C NMR spectra, or 2D correlation spectroscopy (advanced problems only). I like to set it to choose a random exercise and try to do one per day!

Princeton University Mechanism Club

Princeton University; advanced/specialist level
An archive of mechanistic problem sets from the 2000's.

Joseph Topczewski problem sets

Joseph Topczewski – University of Minnesota; introductory/advanced level
Topic groups of mechanism problems – click through to find the answers.

Dirk Trauner group problem sets

Dirk Trauner group – University of Pennsylvania; advanced/specialist level
Problem sets derived from complex literature total synthesis, and ranked according to difficulty. Answers are provided separately.

University of Washington problem sets

University of Washington; advanced/specialist level
Mechanistic synthetic chemistry problems.

Yunus Türkmen group problem sets

Yunus Türkmen group – Bilkent University; advanced/specialist level
Synthetic chemistry group meeting problems.

University of Utah Synthesis Club problem sets

University of Utah; advanced/specialist level
Short, mechanistic, group meeting problem sets from before 2020.


Structure Elucidation Problems

Organic Structure Elucidation

Bradley Smith, Bill Boggess, & Jaroslav ZajicekUniversity of Notre Dame; advanced level
A workbook of structural determination problems, providing EI-MS, NMR and IR spectral data along with a molecular formula to elucidate the molecule. Answers are provided separately.

WebSpectra

Craig Merlic & Jane Strouse – UCLA; advanced level
Structural determination problems, providing NMR and IR spectral data along with a molecular formula to elucidate the molecule. Answers are provided separately.

CU Boulder Spectroscopy Problems

CU Boulder; introductory/advanced level
A series of structural determination problems, providing NMR and IR spectral data along with a molecular formula to elucidate the molecule. Answers are provided via links on each page.

Assorted automation chemistry videos

Various; specialist level
A link to my collection of resources for lab automation and HTE, including several video seminars.

Chris Cramer YouTube channel

Chris Cramer – University of Minnesota; advanced level
A series of videos on statistical mechanics, thermodynamics, and physical chemistry.

ChemTube3D

Nick Greeves – University of Liverpool; introductory level
Introductory animated video and interactive resources for learning organic chemistry. Inclusive of undergraduate and A level students.

Mike Evans Organic Chemistry

Mike Evans – Georgia Tech; introductory level
Hundreds of short videos on introductory topics in organic chemistry.

Global NMR Discussion Meetings

Global NMR Discussion Meetings team; specialist level
Seminar videos on specialist NMR topics.

Imperial College London seminar videos

Imperial College London; advanced/specialist level
A historical collection of longer seminar videos from highly-esteemed academics.

JMP webinar library

JMP; advanced/specialist level
An impressive library of training webinars on DoE and data science.

Fang Liu group computational chemistry tutorials

Fang Liu – Emory University; specialist level
A series of tutorials for beginner computational chemists.

MolSSI Educational Resources

MolSSI; specialist level
Workshops and tutorials on various aspects of/for computational chemistry, categorized by topic.

NSF Center for C–H Functionalization seminar videos

NSF-CCHF; advanced/specialist level
A long-running seminar series on C–H functionalization from established academics. Talks are generally ~30 min in length.

OCHeM

Thomas Poon – Loyola Marymount University; introductory level
An archive of quick introductory lecture videos.

  • Introductory organic chemistry
  • Mechanism
  • Introductory organic spectroscopy

OpenChem

UC Irvine; introductory/advanced level
A full curriculum of recorded lectures for undergraduates and MS/PhD students.

  • General chemistry (similar to A level)
  • Introductory organic chemistry
  • Introductory inorganic chemistry
  • Physical chemistry
  • Organic mechanisms
  • Spectroscopy

Scientific Update webinar archive

Scientific Update; advanced/specialist level
Archive of practically-useful training webinars from Scientific Update. For most, you only have to enter your email address to access the videos.

Synthesis Workshop YouTube channel

Synthesis Workshop; advanced/specialist level
A YouTube channel of short guest lectures on all manner of topics in and around organic chemistry.

ACS DoC data repository

ACS Division of Organic Chemistry; advanced/specialist level
A brilliantly-curated list of so many organic chemistry resources.

  • Synthetic chemistry
  • Spectroscopy
  • Chemical data
  • Videos
  • Safety resources
  • Education
  • Lab techniques and tips

Drug Discovery Resources

Cambridge MedChem Consulting; advanced/specialist level
An amazing list of tools and resources for all stages of medicinal chemistry.

University of Dundee organic & medicinal chemistry padlets

UC Davis; advanced/specialist level
Padlets (shareable content repositories) of handy reference resources for both organic and medicinal chemistry data.

Dan Lehnherr resource list

Dan Lehnherr – Merck; advanced/specialist level
A large list of fantastic organic chemistry resources.

  • Databases
  • Lab tools and software
  • Lecture notes
  • Problem sets

Reddit crowdsourced resource list

Reddit; advanced/specialist level
A very comprehensive Reddit thread of users' favourite chemistry tools.

ROAR digital resources

Centre for Rapid Online Analysis of Reactions, Imperial College London; advanced/specialist level
Training resources for analytical chemistry, flow chemistry, and chemistry data.

UC Davis NMR resources

UC Davis; advanced/specialist level
Training and education resources for NMR spectroscopy.